Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899261.1_cds_XP_016449240.1_43812
CDS Infomation

[gene=LOC107774260] [db_xref=GeneID:107774260] [protein=probable trehalose-phosphate phosphatase H] [partial=3'] [protein_id=XP_016449240.1] [location=join(123089..123346,123453..123593,123703..123867,123979..124038,124146..124247,124355..124432,124553..124693,124791..124883,126003..>126192)] [gbkey=CDS]
Sequence

ATGACGAACCAGAATGTGATTGTTTCTGACCCGAGATCAGGGTTGGAGTCTTCTTTCTTA
TCGTTCTCACCGGCTGTTCCCGGACCACTACCGCCGCCGGGGAGATTCATCGCCGTTCCG
GCGAAGAAATCATTCAAGAACATTGAGTCTGCTGCCGGTGATCATGGAGCTAATAGGATT
ACTGCTTTACTTGATTCCATGAGAGCTTCTTCCCCACCTCGTAGATCCTCTGAAACTGAA
AATCTCAAGTCTTGGATTGTTCATCATCCCTCAGCTTTGGACATGTTCGAGGAAATTATA
AATGCTTCAAAAGGGAAACAAATAATAATGTTTTTGGACTACGATGGCACATTGTCTCCT
ATTGTTGATGATCCTGACAAAGCCTTTATGACTGCTGAGATGAGGGAAGCAGTGAGAGAC
ACAGCCAAGTATTTTCCTACAGCAATAGTGAGTGGAAGATGCAGAGCAAAAGTCTTTAAT
TTCGTAAAGTTATCAGAACTGTATTATGCTGGAAGTCATGGAATGGACATTAAGGCGCCT
GCTAAAGGACGCAAATATAGAAATGGAAATAATCAAACTGTTCTCTGCCAACCTGCCAGA
GAATTTTTACCTATGATTGATGAGGTATATAAATCTTTAGTGGAGAAAACAAAATCTATA
CCAGGAGCGAAAGTGGAAAACAACAAATTCTGCTTATCCGTACATTTCCGTCGTGTTGAA
GAAAAGAGGTGGACTGAATTAGCTGAGCAAGTGAAGTCAGTGACTAAGGAATACCCAAAA
CTTCGATTAACTCAAGGAAGAAAGGTTTTGGAGATTCGTCCCAGCATTAAATGGGACAAG
GGAAAGGCACTTGAATTTTTGTTGGAATCATTAGGGTATGCTAATTCAAATGATGTTTTG
CCTATATACATTGGCGATGATCGAACAGATGAAGATGCTTTCAAGGTTTTGCGCGACAGA
GGACAAGGTTTTGGAATATTAGTGTCCAAAGCACCTAAAGAAACGAATGCTTCCTATTCT
TTGCAAGAGCCATTAGAGGCAGGAAATAGAGATCGGGATGATGGAGACTTGGAGAAGTAT
AGTATAAATCAAATAGAAGGCTCGTTCGTAGATCAGCACAAAGCTATTAATCCAATCCGA
TCCAAGATGAGTAATCGAGTTCTTCTTCCTATGGTTGGCACGAGAATCCGTCTCAAAGGG
GATCATCTACCGATATATCCTAGTAAAG

Peptide Sequence

PEP ID

XP_016449240.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase H, partial [Nicotiana tabacum]
Sequence

MTNQNVIVSDPRSGLESSFLSFSPAVPGPLPPPGRFIAVPAKKSFKNIESAAGDHGANRI
TALLDSMRASSPPRRSSETENLKSWIVHHPSALDMFEEIINASKGKQIIMFLDYDGTLSP
IVDDPDKAFMTAEMREAVRDTAKYFPTAIVSGRCRAKVFNFVKLSELYYAGSHGMDIKAP
AKGRKYRNGNNQTVLCQPAREFLPMIDEVYKSLVEKTKSIPGAKVENNKFCLSVHFRRVE
EKRWTELAEQVKSVTKEYPKLRLTQGRKVLEIRPSIKWDKGKALEFLLESLGYANSNDVL
PIYIGDDRTDEDAFKVLRDRGQGFGILVSKAPKETNASYSLQEPLEAGNRDRDDGDLEKY
SINQIEGSFVDQHKAINPIRSKMSNRVLLPMVGTRIRLKGDHLPIYPSK

Transcript Sequence

Gene sequence data has not been registered.